Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Samm50Q8BGH2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Samm50Q8BGH2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Gm18206-201ENSMUST00000207027 926 ntBASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Gm19164-201ENSMUST00000210667 640 ntBASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.58■□□□□ 0.4
Samm50Q8BGH2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Samm50Q8BGH2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Samm50Q8BGH2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Samm50Q8BGH2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Samm50Q8BGH2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms