Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm5035-201ENSMUST00000215581 927 ntBASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.78■□□□□ 0.28
Trnp1Q80ZI1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm2451-201ENSMUST00000199447 999 ntBASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Gm10290-201ENSMUST00000200451 999 ntBASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trnp1Q80ZI1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.77■□□□□ 0.27
Trnp1Q80ZI1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Mir6420-201ENSMUST00000185032 102 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trnp1Q80ZI1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Mir125a-201ENSMUST00000083545 68 ntBASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trnp1Q80ZI1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.74■□□□□ 0.27
Trnp1Q80ZI1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms