Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm11025-201ENSMUST00000140773 466 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm24513-201ENSMUST00000174964 138 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.48■□□□□ 0.07
Trim62Q80V85 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.48■□□□□ 0.07
Trim62Q80V85 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trim62Q80V85 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Gm27397-201ENSMUST00000184997 107 ntBASIC15.47■□□□□ 0.07
Trim62Q80V85 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trim62Q80V85 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trim62Q80V85 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.46■□□□□ 0.07
Trim62Q80V85 Rpph1-201ENSMUST00000175096 319 ntBASIC15.46■□□□□ 0.07
Trim62Q80V85 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.46■□□□□ 0.07
Trim62Q80V85 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trim62Q80V85 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trim62Q80V85 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Trim62Q80V85 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Trim62Q80V85 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trim62Q80V85 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Trim62Q80V85 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Mir1895-201ENSMUST00000122615 79 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm25911-201ENSMUST00000157621 56 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Gm18737-201ENSMUST00000173594 937 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.45■□□□□ 0.06
Trim62Q80V85 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim62Q80V85 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.45■□□□□ 0.06
Trim62Q80V85 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms