Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Ddx55Q6ZPL9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx55Q6ZPL9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm11478-201ENSMUST00000117851 599 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm12091-201ENSMUST00000146791 830 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm2451-201ENSMUST00000199447 999 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm10290-201ENSMUST00000200451 999 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm45453-201ENSMUST00000211758 853 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Gm15823-201ENSMUST00000064305 670 ntBASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx55Q6ZPL9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx55Q6ZPL9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Gm21854-201ENSMUST00000179901 471 ntBASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.93■□□□□ 0.3
Ddx55Q6ZPL9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms