Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Gm28659-201ENSMUST00000188013 759 ntBASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sp140Q6NSQ5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp140Q6NSQ5 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.21■□□□□ 0.02
Sp140Q6NSQ5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sp140Q6NSQ5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sp140Q6NSQ5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Gm18246-201ENSMUST00000221023 728 ntBASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sp140Q6NSQ5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Gm13036-201ENSMUST00000117799 748 ntBASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Mir5131-201ENSMUST00000175426 93 ntBASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sp140Q6NSQ5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.17■□□□□ 0.02
Sp140Q6NSQ5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms