Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm2451-201ENSMUST00000199447 999 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm10290-201ENSMUST00000200451 999 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm45098-201ENSMUST00000207179 657 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Rarb-207ENSMUST00000225921 2756 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm13786-201ENSMUST00000122371 333 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm22331-201ENSMUST00000158066 136 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.15□□□□□ -0.46
Col7a1Q63870 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col7a1Q63870 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.15□□□□□ -0.47
Col7a1Q63870 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col7a1Q63870 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col7a1Q63870 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Col7a1Q63870 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col7a1Q63870 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm42627-201ENSMUST00000197347 224 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Rps4l-202ENSMUST00000204242 789 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm6082-201ENSMUST00000215204 454 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Snora73a-201ENSMUST00000082453 205 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 Gm18935-201ENSMUST00000212692 664 ntBASIC12.14□□□□□ -0.47
Col7a1Q63870 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.14□□□□□ -0.47
Col7a1Q63870 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.13□□□□□ -0.47
Col7a1Q63870 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.13□□□□□ -0.47
Col7a1Q63870 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm8969-201ENSMUST00000199694 526 ntBASIC12.13□□□□□ -0.47
Col7a1Q63870 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col7a1Q63870 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
Col7a1Q63870 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.12□□□□□ -0.47
Col7a1Q63870 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.12□□□□□ -0.47
Col7a1Q63870 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.12□□□□□ -0.47
Col7a1Q63870 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col7a1Q63870 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.12□□□□□ -0.47
Col7a1Q63870 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col7a1Q63870 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms