Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.07□□□□□ -0.64
Foxc1Q61572 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Foxc1Q61572 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.07□□□□□ -0.64
Foxc1Q61572 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Foxc1Q61572 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Foxc1Q61572 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Sybu-209ENSMUST00000228639 4113 ntBASIC11.06□□□□□ -0.64
Foxc1Q61572 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm15626-201ENSMUST00000117478 868 ntBASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm11764-201ENSMUST00000120221 623 ntBASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm15467-201ENSMUST00000120582 445 ntBASIC11.06□□□□□ -0.64
Foxc1Q61572 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.06□□□□□ -0.64
Foxc1Q61572 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.06□□□□□ -0.64
Foxc1Q61572 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.06□□□□□ -0.64
Foxc1Q61572 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Foxc1Q61572 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Foxc1Q61572 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm6736-201ENSMUST00000166583 948 ntBASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm28975-201ENSMUST00000186412 686 ntBASIC11.05□□□□□ -0.64
Foxc1Q61572 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Psmb5-202ENSMUST00000227257 622 ntBASIC11.05□□□□□ -0.64
Foxc1Q61572 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Foxc1Q61572 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Foxc1Q61572 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms