Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.6■□□□□ 0.25
Ift88Q61371 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ift88Q61371 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.6■□□□□ 0.25
Ift88Q61371 Carlr-201ENSMUST00000181515 2574 ntBASIC16.6■□□□□ 0.25
Ift88Q61371 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Ift88Q61371 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.6■□□□□ 0.25
Ift88Q61371 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.6■□□□□ 0.25
Ift88Q61371 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.6■□□□□ 0.25
Ift88Q61371 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.6■□□□□ 0.25
Ift88Q61371 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.6■□□□□ 0.25
Ift88Q61371 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.6■□□□□ 0.25
Ift88Q61371 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ift88Q61371 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.59■□□□□ 0.25
Ift88Q61371 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ift88Q61371 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.59■□□□□ 0.25
Ift88Q61371 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.59■□□□□ 0.25
Ift88Q61371 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.59■□□□□ 0.25
Ift88Q61371 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ift88Q61371 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ift88Q61371 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ift88Q61371 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ift88Q61371 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Gm14859-201ENSMUST00000117752 357 ntBASIC16.58■□□□□ 0.24
Ift88Q61371 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.58■□□□□ 0.24
Ift88Q61371 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.58■□□□□ 0.24
Ift88Q61371 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.58■□□□□ 0.24
Ift88Q61371 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.58■□□□□ 0.24
Ift88Q61371 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.58■□□□□ 0.24
Ift88Q61371 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
Ift88Q61371 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.58■□□□□ 0.24
Ift88Q61371 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Ift88Q61371 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ift88Q61371 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ift88Q61371 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ift88Q61371 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms