Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm9823-201ENSMUST00000051212 327 ntBASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm26464-201ENSMUST00000157094 305 ntBASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm19078-201ENSMUST00000206311 727 ntBASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm7561-201ENSMUST00000211203 886 ntBASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col27a1Q5QNQ9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm6983-201ENSMUST00000214912 628 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm8598-201ENSMUST00000221184 836 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm22018-201ENSMUST00000104357 131 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm27243-201ENSMUST00000183964 521 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Gm19184-201ENSMUST00000196798 928 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col27a1Q5QNQ9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Gm13689-201ENSMUST00000119360 685 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Gm13350-201ENSMUST00000120519 479 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Gm5370-201ENSMUST00000187187 574 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Gm10012-201ENSMUST00000078252 192 ntBASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col27a1Q5QNQ9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col27a1Q5QNQ9 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms