Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp28Q5I043 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Usp28Q5I043 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp28Q5I043 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp28Q5I043 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Gm12008-201ENSMUST00000117791 755 ntBASIC17.02■□□□□ 0.32
Usp28Q5I043 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.02■□□□□ 0.32
Usp28Q5I043 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Usp28Q5I043 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp28Q5I043 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Usp28Q5I043 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Usp28Q5I043 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Usp28Q5I043 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp28Q5I043 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp28Q5I043 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Usp28Q5I043 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Usp28Q5I043 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Gm9103-201ENSMUST00000119371 405 ntBASIC17.01■□□□□ 0.31
Usp28Q5I043 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Usp28Q5I043 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Usp28Q5I043 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Usp28Q5I043 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp28Q5I043 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Gm24589-201ENSMUST00000116692 94 ntBASIC17■□□□□ 0.31
Usp28Q5I043 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp28Q5I043 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17■□□□□ 0.31
Usp28Q5I043 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Usp28Q5I043 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Gm43205-201ENSMUST00000198622 1968 ntBASIC17■□□□□ 0.31
Usp28Q5I043 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 Gm18856-201ENSMUST00000178096 1374 ntBASIC17■□□□□ 0.31
Usp28Q5I043 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Usp28Q5I043 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17■□□□□ 0.31
Usp28Q5I043 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp28Q5I043 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.99■□□□□ 0.31
Usp28Q5I043 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Gm7222-201ENSMUST00000117512 906 ntBASIC16.99■□□□□ 0.31
Usp28Q5I043 Gm15173-201ENSMUST00000122049 433 ntBASIC16.99■□□□□ 0.31
Usp28Q5I043 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.99■□□□□ 0.31
Usp28Q5I043 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Usp28Q5I043 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms