Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Urb1Q571H0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Urb1Q571H0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Urb1Q571H0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Urb1Q571H0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Urb1Q571H0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Gm6888-201ENSMUST00000221983 706 ntBASIC13.79□□□□□ -0.2
Urb1Q571H0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.79□□□□□ -0.2
Urb1Q571H0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Gm6218-201ENSMUST00000219812 628 ntBASIC13.79□□□□□ -0.2
Urb1Q571H0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Urb1Q571H0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Urb1Q571H0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.78□□□□□ -0.2
Urb1Q571H0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.78□□□□□ -0.2
Urb1Q571H0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Gm14722-201ENSMUST00000118943 689 ntBASIC13.78□□□□□ -0.2
Urb1Q571H0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.78□□□□□ -0.2
Urb1Q571H0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.78□□□□□ -0.2
Urb1Q571H0 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.78□□□□□ -0.2
Urb1Q571H0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Urb1Q571H0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Urb1Q571H0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Urb1Q571H0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Gm18049-201ENSMUST00000208909 581 ntBASIC13.77□□□□□ -0.21
Urb1Q571H0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Urb1Q571H0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Urb1Q571H0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms