Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Mir3547-201ENSMUST00000175461 88 ntBASIC18.4■□□□□ 0.54
Vars2Q3U2A8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vars2Q3U2A8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vars2Q3U2A8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vars2Q3U2A8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Vars2Q3U2A8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Vars2Q3U2A8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Gm27572-201ENSMUST00000183702 255 ntBASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Gm37230-201ENSMUST00000194491 818 ntBASIC18.39■□□□□ 0.53
Vars2Q3U2A8 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Gm8463-201ENSMUST00000208573 613 ntBASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vars2Q3U2A8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.38■□□□□ 0.53
Vars2Q3U2A8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm8652-201ENSMUST00000181363 964 ntBASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm7399-201ENSMUST00000032395 858 ntBASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vars2Q3U2A8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm27847-201ENSMUST00000183711 107 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm27375-201ENSMUST00000183799 107 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm29127-201ENSMUST00000188304 517 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm9182-201ENSMUST00000217829 639 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm6091-201ENSMUST00000098307 165 ntBASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vars2Q3U2A8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vars2Q3U2A8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms