Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gm9682-201ENSMUST00000197505 556 ntBASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gm6089-201ENSMUST00000197666 938 ntBASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cul4aQ3TCH7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Gm37153-201ENSMUST00000193637 231 ntBASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cul4aQ3TCH7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.72■□□□□ 0.11
Cul4aQ3TCH7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms