Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm11803-201ENSMUST00000119966 444 ntBASIC18.63■□□□□ 0.57
Cacna1sQ02789 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.63■□□□□ 0.57
Cacna1sQ02789 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm10327-201ENSMUST00000105222 1002 ntBASIC18.63■□□□□ 0.57
Cacna1sQ02789 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm7561-201ENSMUST00000211203 886 ntBASIC18.63■□□□□ 0.57
Cacna1sQ02789 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.62■□□□□ 0.57
Cacna1sQ02789 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Gm19078-201ENSMUST00000206311 727 ntBASIC18.62■□□□□ 0.57
Cacna1sQ02789 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1sQ02789 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Gm26464-201ENSMUST00000157094 305 ntBASIC18.61■□□□□ 0.57
Cacna1sQ02789 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Gm8598-201ENSMUST00000221184 836 ntBASIC18.61■□□□□ 0.57
Cacna1sQ02789 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1sQ02789 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1sQ02789 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm8749-201ENSMUST00000117737 331 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm5370-201ENSMUST00000187187 574 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Gm9823-201ENSMUST00000051212 327 ntBASIC18.6■□□□□ 0.57
Cacna1sQ02789 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1sQ02789 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.59■□□□□ 0.57
Cacna1sQ02789 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Gm6983-201ENSMUST00000214912 628 ntBASIC18.59■□□□□ 0.57
Cacna1sQ02789 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1sQ02789 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms