Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3f3aP84244 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3f3aP84244 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
H3f3aP84244 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.33□□□□□ -0.27
H3f3aP84244 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
H3f3aP84244 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
H3f3aP84244 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
H3f3aP84244 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
H3f3aP84244 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Gm12260-201ENSMUST00000122447 411 ntBASIC13.33□□□□□ -0.28
H3f3aP84244 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.33□□□□□ -0.28
H3f3aP84244 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.33□□□□□ -0.28
H3f3aP84244 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.33□□□□□ -0.28
H3f3aP84244 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
H3f3aP84244 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
H3f3aP84244 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3f3aP84244 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.32□□□□□ -0.28
H3f3aP84244 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.32□□□□□ -0.28
H3f3aP84244 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
H3f3aP84244 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
H3f3aP84244 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.32□□□□□ -0.28
H3f3aP84244 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.32□□□□□ -0.28
H3f3aP84244 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.32□□□□□ -0.28
H3f3aP84244 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.32□□□□□ -0.28
H3f3aP84244 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.32□□□□□ -0.28
H3f3aP84244 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Thap2-203ENSMUST00000218989 527 ntBASIC13.32□□□□□ -0.28
H3f3aP84244 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.32□□□□□ -0.28
H3f3aP84244 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.32□□□□□ -0.28
H3f3aP84244 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
H3f3aP84244 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.32□□□□□ -0.28
H3f3aP84244 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
H3f3aP84244 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3f3aP84244 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
H3f3aP84244 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms