Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Gm5177-201ENSMUST00000183092 997 ntBASIC14.15□□□□□ -0.14
Nup43P59235 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Gm5264-201ENSMUST00000190584 848 ntBASIC14.15□□□□□ -0.14
Nup43P59235 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.15□□□□□ -0.14
Nup43P59235 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nup43P59235 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup43P59235 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup43P59235 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Nup43P59235 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Gm14494-201ENSMUST00000118786 435 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Mir3113-201ENSMUST00000175478 76 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Gm2272-201ENSMUST00000194903 582 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.14□□□□□ -0.15
Nup43P59235 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.14□□□□□ -0.15
Nup43P59235 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.14□□□□□ -0.15
Nup43P59235 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup43P59235 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup43P59235 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup43P59235 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup43P59235 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup43P59235 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Gm17968-201ENSMUST00000194902 784 ntBASIC14.13□□□□□ -0.15
Nup43P59235 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.13□□□□□ -0.15
Nup43P59235 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.13□□□□□ -0.15
Nup43P59235 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup43P59235 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup43P59235 Thap2-203ENSMUST00000218989 527 ntBASIC14.13□□□□□ -0.15
Nup43P59235 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.13□□□□□ -0.15
Nup43P59235 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.13□□□□□ -0.15
Nup43P59235 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup43P59235 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup43P59235 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms