Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nek1P51954 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nek1P51954 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.72■□□□□ 0.27
Nek1P51954 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.72■□□□□ 0.27
Nek1P51954 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nek1P51954 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nek1P51954 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.71■□□□□ 0.27
Nek1P51954 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.71■□□□□ 0.27
Nek1P51954 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Nek1P51954 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nek1P51954 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Nek1P51954 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.71■□□□□ 0.27
Nek1P51954 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Nek1P51954 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.71■□□□□ 0.27
Nek1P51954 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.71■□□□□ 0.27
Nek1P51954 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nek1P51954 Carlr-201ENSMUST00000181515 2574 ntBASIC16.71■□□□□ 0.26
Nek1P51954 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nek1P51954 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.7■□□□□ 0.26
Nek1P51954 Gm11780-201ENSMUST00000136880 516 ntBASIC16.7■□□□□ 0.26
Nek1P51954 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.7■□□□□ 0.26
Nek1P51954 Gm10499-201ENSMUST00000174094 934 ntBASIC16.7■□□□□ 0.26
Nek1P51954 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.7■□□□□ 0.26
Nek1P51954 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.7■□□□□ 0.26
Nek1P51954 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.7■□□□□ 0.26
Nek1P51954 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nek1P51954 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nek1P51954 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.7■□□□□ 0.26
Nek1P51954 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.7■□□□□ 0.26
Nek1P51954 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nek1P51954 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nek1P51954 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.69■□□□□ 0.26
Nek1P51954 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.69■□□□□ 0.26
Nek1P51954 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.69■□□□□ 0.26
Nek1P51954 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nek1P51954 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Nek1P51954 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.69■□□□□ 0.26
Nek1P51954 Gm43575-201ENSMUST00000196420 516 ntBASIC16.69■□□□□ 0.26
Nek1P51954 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nek1P51954 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nek1P51954 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nek1P51954 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nek1P51954 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.68■□□□□ 0.26
Nek1P51954 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nek1P51954 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nek1P51954 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nek1P51954 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms