Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.7□□□□□ -0.38
Hist1h1dP43277 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.7□□□□□ -0.38
Hist1h1dP43277 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.7□□□□□ -0.38
Hist1h1dP43277 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Carlr-201ENSMUST00000181515 2574 ntBASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.7□□□□□ -0.38
Hist1h1dP43277 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1dP43277 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.69□□□□□ -0.38
Hist1h1dP43277 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gm15372-201ENSMUST00000120729 834 ntBASIC12.69□□□□□ -0.38
Hist1h1dP43277 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hist1h1dP43277 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Hist1h1dP43277 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hist1h1dP43277 Gm8097-201ENSMUST00000117903 829 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms