Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Gm27847-201ENSMUST00000183711 107 ntBASIC15.72■□□□□ 0.11
HttP42859 Gm27375-201ENSMUST00000183799 107 ntBASIC15.72■□□□□ 0.11
HttP42859 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
HttP42859 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.72■□□□□ 0.11
HttP42859 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HttP42859 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
HttP42859 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.71■□□□□ 0.11
HttP42859 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.71■□□□□ 0.11
HttP42859 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.71■□□□□ 0.11
HttP42859 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.71■□□□□ 0.11
HttP42859 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.71■□□□□ 0.11
HttP42859 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HttP42859 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HttP42859 Gm26083-201ENSMUST00000157904 193 ntBASIC15.7■□□□□ 0.1
HttP42859 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HttP42859 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HttP42859 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HttP42859 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HttP42859 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
HttP42859 Gm33320-201ENSMUST00000192232 530 ntBASIC15.7■□□□□ 0.1
HttP42859 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.7■□□□□ 0.1
HttP42859 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.7■□□□□ 0.1
HttP42859 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HttP42859 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HttP42859 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC15.69■□□□□ 0.1
HttP42859 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.69■□□□□ 0.1
HttP42859 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.69■□□□□ 0.1
HttP42859 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.69■□□□□ 0.1
HttP42859 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.69■□□□□ 0.1
HttP42859 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.69■□□□□ 0.1
HttP42859 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HttP42859 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.69■□□□□ 0.1
HttP42859 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HttP42859 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Gm27501-201ENSMUST00000183599 107 ntBASIC15.68■□□□□ 0.1
HttP42859 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.68■□□□□ 0.1
HttP42859 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
HttP42859 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.68■□□□□ 0.1
HttP42859 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.68■□□□□ 0.1
HttP42859 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HttP42859 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms