Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.69□□□□□ -0.54
Ccl6P27784 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm6550-201ENSMUST00000187574 993 ntBASIC11.69□□□□□ -0.54
Ccl6P27784 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccl6P27784 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.69□□□□□ -0.54
Ccl6P27784 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.69□□□□□ -0.54
Ccl6P27784 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.69□□□□□ -0.54
Ccl6P27784 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.68□□□□□ -0.54
Ccl6P27784 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm7222-201ENSMUST00000117512 906 ntBASIC11.68□□□□□ -0.54
Ccl6P27784 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm7230-201ENSMUST00000173026 815 ntBASIC11.68□□□□□ -0.54
Ccl6P27784 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccl6P27784 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Gm10060-201ENSMUST00000212002 111 ntBASIC11.68□□□□□ -0.54
Ccl6P27784 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccl6P27784 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Ccl6P27784 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccl6P27784 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccl6P27784 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Gm37153-201ENSMUST00000193637 231 ntBASIC11.67□□□□□ -0.54
Ccl6P27784 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccl6P27784 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccl6P27784 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms