Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cd40P27512 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cd40P27512 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Gm11779-201ENSMUST00000118541 368 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Gm16198-201ENSMUST00000118766 670 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Gm15467-201ENSMUST00000120582 445 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 Gm27301-201ENSMUST00000184012 127 ntBASIC13.54□□□□□ -0.24
Cd40P27512 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cd40P27512 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cd40P27512 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.54□□□□□ -0.24
Cd40P27512 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cd40P27512 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cd40P27512 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cd40P27512 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.53□□□□□ -0.24
Cd40P27512 Mir3113-201ENSMUST00000175478 76 ntBASIC13.53□□□□□ -0.24
Cd40P27512 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.53□□□□□ -0.24
Cd40P27512 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.53□□□□□ -0.24
Cd40P27512 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.53□□□□□ -0.24
Cd40P27512 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.53□□□□□ -0.24
Cd40P27512 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.53□□□□□ -0.24
Cd40P27512 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.53□□□□□ -0.24
Cd40P27512 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cd40P27512 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cd40P27512 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cd40P27512 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cd40P27512 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40P27512 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.52□□□□□ -0.25
Cd40P27512 Gm17968-201ENSMUST00000194902 784 ntBASIC13.52□□□□□ -0.25
Cd40P27512 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.52□□□□□ -0.25
Cd40P27512 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.52□□□□□ -0.25
Cd40P27512 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cd40P27512 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.52□□□□□ -0.25
Cd40P27512 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms