Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
Tnfrsf1aP25118 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm7153-201ENSMUST00000117092 455 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm10499-201ENSMUST00000174094 934 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm27459-201ENSMUST00000184860 107 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44357-201ENSMUST00000195897 142 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm19658-201ENSMUST00000196231 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44367-201ENSMUST00000196836 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44350-201ENSMUST00000197197 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44390-201ENSMUST00000197533 144 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44313-201ENSMUST00000198018 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44486-201ENSMUST00000198508 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44314-201ENSMUST00000199263 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44394-201ENSMUST00000199558 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44484-201ENSMUST00000199873 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44466-201ENSMUST00000200264 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44359-201ENSMUST00000200671 138 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Gm6376-201ENSMUST00000209407 580 ntBASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tnfrsf1aP25118 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Gm6089-201ENSMUST00000197666 938 ntBASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf1aP25118 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms