Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.36■□□□□ 0.21
Pde6bP23440 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.36■□□□□ 0.21
Pde6bP23440 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pde6bP23440 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pde6bP23440 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pde6bP23440 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.36■□□□□ 0.21
Pde6bP23440 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Pde6bP23440 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pde6bP23440 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Mir449b-201ENSMUST00000104833 80 ntBASIC16.35■□□□□ 0.21
Pde6bP23440 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Pde6bP23440 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.35■□□□□ 0.21
Pde6bP23440 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.35■□□□□ 0.21
Pde6bP23440 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.35■□□□□ 0.21
Pde6bP23440 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pde6bP23440 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pde6bP23440 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.34■□□□□ 0.21
Pde6bP23440 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pde6bP23440 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.34■□□□□ 0.21
Pde6bP23440 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.34■□□□□ 0.21
Pde6bP23440 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.34■□□□□ 0.21
Pde6bP23440 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.34■□□□□ 0.21
Pde6bP23440 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pde6bP23440 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.34■□□□□ 0.21
Pde6bP23440 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pde6bP23440 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Pde6bP23440 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pde6bP23440 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Gm27430-201ENSMUST00000184585 107 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Gm44333-201ENSMUST00000197168 107 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Gm7774-201ENSMUST00000200064 533 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pde6bP23440 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.33■□□□□ 0.2
Pde6bP23440 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.33■□□□□ 0.2
Pde6bP23440 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pde6bP23440 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Pde6bP23440 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.33■□□□□ 0.2
Pde6bP23440 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pde6bP23440 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms