Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.34□□□□□ -0.75
Smim1P0C8K7 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.33□□□□□ -0.76
Smim1P0C8K7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Acot6-202ENSMUST00000222921 3622 ntBASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
Smim1P0C8K7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smim1P0C8K7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.32□□□□□ -0.76
Smim1P0C8K7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.32□□□□□ -0.76
Smim1P0C8K7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smim1P0C8K7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.32□□□□□ -0.76
Smim1P0C8K7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smim1P0C8K7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.31□□□□□ -0.76
Smim1P0C8K7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smim1P0C8K7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smim1P0C8K7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms