Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm27838-201ENSMUST00000184829 128 ntBASIC17.71■□□□□ 0.43
Col3a1P08121 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col3a1P08121 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col3a1P08121 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.71■□□□□ 0.43
Col3a1P08121 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col3a1P08121 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col3a1P08121 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col3a1P08121 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Col3a1P08121 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col3a1P08121 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col3a1P08121 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Col3a1P08121 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Col3a1P08121 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col3a1P08121 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col3a1P08121 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.69■□□□□ 0.42
Col3a1P08121 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.69■□□□□ 0.42
Col3a1P08121 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Col3a1P08121 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Col3a1P08121 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.69■□□□□ 0.42
Col3a1P08121 Gm7730-201ENSMUST00000212486 454 ntBASIC17.69■□□□□ 0.42
Col3a1P08121 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col3a1P08121 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.69■□□□□ 0.42
Col3a1P08121 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.68■□□□□ 0.42
Col3a1P08121 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.68■□□□□ 0.42
Col3a1P08121 Syt7-204ENSMUST00000223586 1344 ntBASIC17.68■□□□□ 0.42
Col3a1P08121 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col3a1P08121 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Col3a1P08121 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Col3a1P08121 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Col3a1P08121 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms