Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxa3P02831 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Gm17271-201ENSMUST00000165535 355 ntBASIC12.57□□□□□ -0.4
Hoxa3P02831 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxa3P02831 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxa3P02831 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxa3P02831 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.57□□□□□ -0.4
Hoxa3P02831 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa3P02831 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.56□□□□□ -0.4
Hoxa3P02831 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.56□□□□□ -0.4
Hoxa3P02831 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.56□□□□□ -0.4
Hoxa3P02831 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.56□□□□□ -0.4
Hoxa3P02831 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.56□□□□□ -0.4
Hoxa3P02831 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa3P02831 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa3P02831 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Gm26308-201ENSMUST00000157768 69 ntBASIC12.55□□□□□ -0.4
Hoxa3P02831 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.55□□□□□ -0.4
Hoxa3P02831 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxa3P02831 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxa3P02831 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxa3P02831 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.54□□□□□ -0.4
Hoxa3P02831 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxa3P02831 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms