Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.62■□□□□ 0.09
Ttc3O88196 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Ttc3O88196 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.62■□□□□ 0.09
Ttc3O88196 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ttc3O88196 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.61■□□□□ 0.09
Ttc3O88196 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.61■□□□□ 0.09
Ttc3O88196 Gm37230-201ENSMUST00000194491 818 ntBASIC15.61■□□□□ 0.09
Ttc3O88196 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.61■□□□□ 0.09
Ttc3O88196 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ttc3O88196 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ttc3O88196 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.6■□□□□ 0.09
Ttc3O88196 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ttc3O88196 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.6■□□□□ 0.09
Ttc3O88196 Shd-206ENSMUST00000225145 998 ntBASIC15.6■□□□□ 0.09
Ttc3O88196 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.6■□□□□ 0.09
Ttc3O88196 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ttc3O88196 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ttc3O88196 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ttc3O88196 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.59■□□□□ 0.09
Ttc3O88196 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ttc3O88196 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ttc3O88196 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.58■□□□□ 0.09
Ttc3O88196 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Ttc3O88196 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.58■□□□□ 0.09
Ttc3O88196 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.58■□□□□ 0.09
Ttc3O88196 Gm7775-201ENSMUST00000218871 853 ntBASIC15.58■□□□□ 0.09
Ttc3O88196 Gm6888-201ENSMUST00000221983 706 ntBASIC15.58■□□□□ 0.09
Ttc3O88196 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ttc3O88196 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ttc3O88196 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Ttc3O88196 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ttc3O88196 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ttc3O88196 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ttc3O88196 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ttc3O88196 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ttc3O88196 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Ttc3O88196 Gm9726-201ENSMUST00000180321 678 ntBASIC15.58■□□□□ 0.08
Ttc3O88196 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms