Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Alx3O70137 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Alx3O70137 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Alx3O70137 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Alx3O70137 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Alx3O70137 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Alx3O70137 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.68□□□□□ -0.22
Alx3O70137 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.68□□□□□ -0.22
Alx3O70137 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.68□□□□□ -0.22
Alx3O70137 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Alx3O70137 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Alx3O70137 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Alx3O70137 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.67□□□□□ -0.22
Alx3O70137 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx3O70137 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Alx3O70137 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.67□□□□□ -0.22
Alx3O70137 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.67□□□□□ -0.22
Alx3O70137 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.67□□□□□ -0.22
Alx3O70137 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Alx3O70137 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx3O70137 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.66□□□□□ -0.22
Alx3O70137 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Alx3O70137 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Alx3O70137 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Alx3O70137 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.66□□□□□ -0.22
Alx3O70137 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Alx3O70137 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC13.66□□□□□ -0.22
Alx3O70137 Gm17807-201ENSMUST00000186869 298 ntBASIC13.66□□□□□ -0.22
Alx3O70137 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Alx3O70137 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx3O70137 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx3O70137 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms