Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.18■□□□□ 0.34
Copb2O55029 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Copb2O55029 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.18■□□□□ 0.34
Copb2O55029 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Copb2O55029 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.18■□□□□ 0.34
Copb2O55029 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Copb2O55029 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
Copb2O55029 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.18■□□□□ 0.34
Copb2O55029 Gm5779-201ENSMUST00000218467 910 ntBASIC17.18■□□□□ 0.34
Copb2O55029 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.18■□□□□ 0.34
Copb2O55029 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Copb2O55029 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.18■□□□□ 0.34
Copb2O55029 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Copb2O55029 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Copb2O55029 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.17■□□□□ 0.34
Copb2O55029 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.17■□□□□ 0.34
Copb2O55029 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Copb2O55029 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gm22065-201ENSMUST00000103753 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm22066-201ENSMUST00000103761 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24932-201ENSMUST00000103763 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24115-201ENSMUST00000103799 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm22190-201ENSMUST00000103827 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm22191-201ENSMUST00000103831 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24721-201ENSMUST00000103849 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm28018-201ENSMUST00000103869 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm26399-201ENSMUST00000103937 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gm22175-201ENSMUST00000175007 78 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24158-201ENSMUST00000175263 71 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gm25349-201ENSMUST00000177728 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm23616-201ENSMUST00000177797 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm25871-201ENSMUST00000177816 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24752-201ENSMUST00000178240 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24496-201ENSMUST00000178287 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm25649-201ENSMUST00000178476 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm25548-201ENSMUST00000178681 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm23147-201ENSMUST00000178841 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm26095-201ENSMUST00000179270 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm22171-201ENSMUST00000179283 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm23936-201ENSMUST00000179354 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm22619-201ENSMUST00000179516 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm25255-201ENSMUST00000179579 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24755-201ENSMUST00000179691 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm26506-201ENSMUST00000179692 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm25086-201ENSMUST00000179931 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm23243-201ENSMUST00000180047 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24659-201ENSMUST00000180212 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm24169-201ENSMUST00000180244 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm23689-201ENSMUST00000180354 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm27359-201ENSMUST00000184153 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm27785-201ENSMUST00000184268 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm27466-201ENSMUST00000184396 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm27703-201ENSMUST00000184836 110 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.17■□□□□ 0.34
Copb2O55029 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.17■□□□□ 0.34
Copb2O55029 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Copb2O55029 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.17■□□□□ 0.34
Copb2O55029 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Copb2O55029 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms