Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccr6O54689 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.57□□□□□ -0.4
Ccr6O54689 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ccr6O54689 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ccr6O54689 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ccr6O54689 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccr6O54689 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccr6O54689 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccr6O54689 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccr6O54689 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccr6O54689 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccr6O54689 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccr6O54689 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccr6O54689 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ccr6O54689 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.56□□□□□ -0.4
Ccr6O54689 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccr6O54689 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccr6O54689 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccr6O54689 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.55□□□□□ -0.4
Ccr6O54689 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.55□□□□□ -0.4
Ccr6O54689 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccr6O54689 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms