Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk3O35492 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk3O35492 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.29□□□□□ -0.12
Clk3O35492 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk3O35492 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk3O35492 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk3O35492 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clk3O35492 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk3O35492 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Clk3O35492 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Mir8098-201ENSMUST00000184011 137 ntBASIC14.28□□□□□ -0.12
Clk3O35492 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.28□□□□□ -0.12
Clk3O35492 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.28□□□□□ -0.12
Clk3O35492 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk3O35492 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk3O35492 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clk3O35492 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Clk3O35492 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clk3O35492 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk3O35492 Gm12134-201ENSMUST00000122109 520 ntBASIC14.27□□□□□ -0.13
Clk3O35492 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.27□□□□□ -0.13
Clk3O35492 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Clk3O35492 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Clk3O35492 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk3O35492 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.27□□□□□ -0.13
Clk3O35492 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.26□□□□□ -0.13
Clk3O35492 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clk3O35492 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk3O35492 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.26□□□□□ -0.13
Clk3O35492 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.26□□□□□ -0.13
Clk3O35492 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk3O35492 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clk3O35492 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Clk3O35492 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.26□□□□□ -0.13
Clk3O35492 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk3O35492 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms