Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Capn1O35350 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.9□□□□□ -0.18
Capn1O35350 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Capn1O35350 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Capn1O35350 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.9□□□□□ -0.18
Capn1O35350 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Capn1O35350 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Capn1O35350 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.9□□□□□ -0.19
Capn1O35350 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Capn1O35350 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Capn1O35350 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.89□□□□□ -0.19
Capn1O35350 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Gm17271-201ENSMUST00000165535 355 ntBASIC13.89□□□□□ -0.19
Capn1O35350 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.89□□□□□ -0.19
Capn1O35350 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Gm44492-201ENSMUST00000197012 141 ntBASIC13.89□□□□□ -0.19
Capn1O35350 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.89□□□□□ -0.19
Capn1O35350 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.89□□□□□ -0.19
Capn1O35350 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.89□□□□□ -0.19
Capn1O35350 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Capn1O35350 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.89□□□□□ -0.19
Capn1O35350 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Capn1O35350 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.88□□□□□ -0.19
Capn1O35350 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Capn1O35350 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Capn1O35350 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Capn1O35350 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Capn1O35350 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Capn1O35350 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms