Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Mir3113-201ENSMUST00000175478 76 ntBASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Gm27301-201ENSMUST00000184012 127 ntBASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf11aO35305 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tnfrsf11aO35305 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm25911-201ENSMUST00000157621 56 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Mir8117-201ENSMUST00000184773 107 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm8000-201ENSMUST00000188378 592 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Gm10154-201ENSMUST00000084445 354 ntBASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tnfrsf11aO35305 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tnfrsf11aO35305 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Gm20553-201ENSMUST00000204205 844 ntBASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tnfrsf11aO35305 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11aO35305 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tnfrsf11aO35305 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tnfrsf11aO35305 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms