Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Gm6912-201ENSMUST00000117218 544 ntBASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Olfr286-202ENSMUST00000205305 969 ntBASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
B020004C17RikJ3QP07 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Gm9908-201ENSMUST00000211534 448 ntBASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.62■□□□□ 0.25
B020004C17RikJ3QP07 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm12091-201ENSMUST00000146791 830 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm37230-201ENSMUST00000194491 818 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm37917-201ENSMUST00000194711 392 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 AA619741-201ENSMUST00000195095 646 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Gm25857-201ENSMUST00000082788 129 ntBASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
B020004C17RikJ3QP07 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Gm12138-201ENSMUST00000122180 951 ntBASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
B020004C17RikJ3QP07 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms