Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm10275-201ENSMUST00000092620 635 ntBASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC26.96■■□□□ 1.91
Ccdc180J3QNE4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Ccdc180J3QNE4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ccdc180J3QNE4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Ccdc180J3QNE4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ccdc180J3QNE4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Gm15823-201ENSMUST00000064305 670 ntBASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ccdc180J3QNE4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Trav13-3-201ENSMUST00000117226 336 ntBASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Gm9726-201ENSMUST00000180321 678 ntBASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ccdc180J3QNE4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Gm9182-201ENSMUST00000217829 639 ntBASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Gm45751-201ENSMUST00000210185 1573 ntBASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Ccdc180J3QNE4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Gm14127-201ENSMUST00000117906 678 ntBASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 AC132467.2-202ENSMUST00000227726 559 ntBASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ccdc180J3QNE4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Gm15678-201ENSMUST00000117573 960 ntBASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ccdc180J3QNE4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ccdc180J3QNE4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms