Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx1-1G3UXB3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm44562-201ENSMUST00000207194 1347 ntBASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Snora78-201ENSMUST00000158630 128 ntBASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Shd-206ENSMUST00000225145 998 ntBASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx1-1G3UXB3 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm12073-201ENSMUST00000117382 524 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm13147-202ENSMUST00000177526 1173 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 AC154515.3-201ENSMUST00000225081 1159 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx1-1G3UXB3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx1-1G3UXB3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm9522-201ENSMUST00000182394 926 ntBASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm38241-201ENSMUST00000192641 898 ntBASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm37714-201ENSMUST00000194742 342 ntBASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Gm36997-201ENSMUST00000195090 707 ntBASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx1-1G3UXB3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms