Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ube4aE9Q735 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.91■□□□□ 0.46
Ube4aE9Q735 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube4aE9Q735 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Shd-206ENSMUST00000225145 998 ntBASIC17.9■□□□□ 0.46
Ube4aE9Q735 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.9■□□□□ 0.46
Ube4aE9Q735 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube4aE9Q735 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube4aE9Q735 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ube4aE9Q735 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube4aE9Q735 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.89■□□□□ 0.46
Ube4aE9Q735 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.89■□□□□ 0.46
Ube4aE9Q735 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm23547-201ENSMUST00000158210 271 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm29310-201ENSMUST00000185468 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21825-201ENSMUST00000185728 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm29109-201ENSMUST00000185895 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21896-201ENSMUST00000186520 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21873-201ENSMUST00000186728 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21794-201ENSMUST00000187056 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21880-201ENSMUST00000187275 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21826-201ENSMUST00000187451 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21198-201ENSMUST00000188393 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21749-201ENSMUST00000189343 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21901-201ENSMUST00000189568 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm29424-201ENSMUST00000189716 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm28599-201ENSMUST00000189838 694 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21867-201ENSMUST00000189917 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm29269-201ENSMUST00000190087 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21722-201ENSMUST00000190153 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm28423-201ENSMUST00000190701 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21899-201ENSMUST00000190745 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21910-201ENSMUST00000191163 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21849-201ENSMUST00000191571 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm28678-201ENSMUST00000191593 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm20910-201ENSMUST00000193268 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm21871-201ENSMUST00000194621 696 ntBASIC17.89■□□□□ 0.45
Ube4aE9Q735 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ube4aE9Q735 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms