Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usf3B2RUQ2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gm27300-201ENSMUST00000184085 97 ntBASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Gm27335-201ENSMUST00000184758 97 ntBASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usf3B2RUQ2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Gm4899-201ENSMUST00000178708 719 ntBASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usf3B2RUQ2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Gm13597-201ENSMUST00000121239 375 ntBASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Gm45747-201ENSMUST00000212203 999 ntBASIC12.5□□□□□ -0.41
Usf3B2RUQ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usf3B2RUQ2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms