Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm18889-201ENSMUST00000174284 929 ntBASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd3B1AR17 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.66□□□□□ -0.06
Chd3B1AR17 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.66□□□□□ -0.06
Chd3B1AR17 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm20949-201ENSMUST00000206478 952 ntBASIC14.66□□□□□ -0.06
Chd3B1AR17 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.66□□□□□ -0.06
Chd3B1AR17 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Chd3B1AR17 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Chd3B1AR17 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.66□□□□□ -0.06
Chd3B1AR17 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Chd3B1AR17 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Gm27622-201ENSMUST00000183779 60 ntBASIC14.65□□□□□ -0.06
Chd3B1AR17 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.65□□□□□ -0.06
Chd3B1AR17 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Chd3B1AR17 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Chd3B1AR17 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.64□□□□□ -0.07
Chd3B1AR17 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.64□□□□□ -0.07
Chd3B1AR17 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.64□□□□□ -0.07
Chd3B1AR17 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Chd3B1AR17 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.64□□□□□ -0.07
Chd3B1AR17 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms