Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc112A0AUP1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Gm18489-201ENSMUST00000172565 551 ntBASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.13■□□□□ 0.33
Ccdc112A0AUP1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc112A0AUP1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Gm13418-201ENSMUST00000119097 944 ntBASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc112A0AUP1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm23547-201ENSMUST00000158210 271 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44357-201ENSMUST00000195897 142 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm19658-201ENSMUST00000196231 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44367-201ENSMUST00000196836 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44350-201ENSMUST00000197197 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44390-201ENSMUST00000197533 144 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44313-201ENSMUST00000198018 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44486-201ENSMUST00000198508 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44314-201ENSMUST00000199263 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44394-201ENSMUST00000199558 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44484-201ENSMUST00000199873 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44466-201ENSMUST00000200264 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Gm44359-201ENSMUST00000200671 138 ntBASIC17.1■□□□□ 0.33
Ccdc112A0AUP1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms