Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lnp1A0A1B0GSK3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Mir5126-201ENSMUST00000175513 77 ntBASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm2651-201ENSMUST00000203560 838 ntBASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm12350-201ENSMUST00000121208 462 ntBASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Gm18195-201ENSMUST00000207604 706 ntBASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Lnp1A0A1B0GSK3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lnp1A0A1B0GSK3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms