Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm8097-201ENSMUST00000117903 829 ntBASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv29A0A0G2LB96 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trbv29A0A0G2LB96 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Carlr-201ENSMUST00000181515 2574 ntBASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Gm27704-201ENSMUST00000185094 107 ntBASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv29A0A0G2LB96 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv29A0A0G2LB96 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms