Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm13312-201ENSMUST00000119631 718 ntBASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Mir3081-201ENSMUST00000175305 84 ntBASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6n-6A0A075B6B2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6n-6A0A075B6B2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Gm27357-201ENSMUST00000183754 135 ntBASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav6n-6A0A075B6B2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav6n-6A0A075B6B2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms