Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.45□□□□□ -0.1
Cldn9Q9Z0S7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn9Q9Z0S7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cldn9Q9Z0S7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cldn9Q9Z0S7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cldn9Q9Z0S7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms