Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
Scn8aQ9WTU3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.02■□□□□ -0
Scn8aQ9WTU3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn8aQ9WTU3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn8aQ9WTU3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Gm13823-201ENSMUST00000119930 345 ntBASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Scn8aQ9WTU3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Gm9867-201ENSMUST00000192212 2647 ntBASIC15□□□□□ -0.01
Scn8aQ9WTU3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn8aQ9WTU3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms