Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim3Q9R1R2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Gm13036-201ENSMUST00000117799 748 ntBASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim3Q9R1R2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim3Q9R1R2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Gm11764-201ENSMUST00000120221 623 ntBASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Gm5682-201ENSMUST00000173402 505 ntBASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim3Q9R1R2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim3Q9R1R2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms