Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Gm15693-201ENSMUST00000120470 637 ntBASIC13.24□□□□□ -0.29
Nubp1Q9R060 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.24□□□□□ -0.29
Nubp1Q9R060 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nubp1Q9R060 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm12008-201ENSMUST00000117791 755 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm25026-201ENSMUST00000175017 188 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm25025-201ENSMUST00000175018 111 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm28631-201ENSMUST00000190740 334 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm43316-201ENSMUST00000197252 1295 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm44683-201ENSMUST00000209088 484 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 CT025561.1-201ENSMUST00000214972 674 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.23□□□□□ -0.29
Nubp1Q9R060 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.23□□□□□ -0.29
Nubp1Q9R060 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nubp1Q9R060 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.22□□□□□ -0.29
Nubp1Q9R060 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms