Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim44Q9QXA7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trim44Q9QXA7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trim44Q9QXA7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.39■□□□□ 0.38
Trim44Q9QXA7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trim44Q9QXA7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim44Q9QXA7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trim44Q9QXA7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim44Q9QXA7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim44Q9QXA7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Gm45003-201ENSMUST00000205875 2158 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 AC121805.2-201ENSMUST00000218808 2538 ntBASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim44Q9QXA7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim44Q9QXA7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms