Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ripk4Q9ERK0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ripk4Q9ERK0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ripk4Q9ERK0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ripk4Q9ERK0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ripk4Q9ERK0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ripk4Q9ERK0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ripk4Q9ERK0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Gm18889-201ENSMUST00000174284 929 ntBASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ripk4Q9ERK0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Rpph1-201ENSMUST00000175096 319 ntBASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ripk4Q9ERK0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms