Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf1Q9EPU4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf1Q9EPU4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Gm9719-201ENSMUST00000162765 543 ntBASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 AC123645.1-201ENSMUST00000228469 605 ntBASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Gm12428-201ENSMUST00000119844 727 ntBASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC20.53■□□□□ 0.88
Cpsf1Q9EPU4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf1Q9EPU4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf1Q9EPU4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Gm5566-201ENSMUST00000116118 459 ntBASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Gm13453-201ENSMUST00000118708 357 ntBASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Gm10275-202ENSMUST00000168697 495 ntBASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Gm27533-201ENSMUST00000183800 152 ntBASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Gm10275-201ENSMUST00000092620 635 ntBASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf1Q9EPU4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf1Q9EPU4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms